ls1-MarDyn
ls1-MarDyn molecular dynamics code
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This is the complete list of members for AutoPasContainer, including all inherited members.
_boundingBoxMax | ParticleContainer | protected |
_boundingBoxMin | ParticleContainer | protected |
addHaloParticle(Molecule &particle, bool inBoxCheckedAlready=false, bool checkWhetherDuplicate=false, const bool &rebuildCaches=false) override | AutoPasContainer | virtual |
addParticle(Molecule &particle, bool inBoxCheckedAlready=false, bool checkWhetherDuplicate=false, const bool &rebuildCaches=false) override | AutoPasContainer | virtual |
addParticles(std::vector< Molecule > &particles, bool checkWhetherDuplicate=false) override | AutoPasContainer | virtual |
AutoPasContainer(double cutoff) (defined in AutoPasContainer) | AutoPasContainer | |
clear() override | AutoPasContainer | virtual |
deleteMolecule(ParticleIterator &moleculeIter, const bool &rebuildCaches) override (defined in AutoPasContainer) | AutoPasContainer | virtual |
deleteOuterParticles() override | AutoPasContainer | virtual |
get_halo_L(int index) const override | AutoPasContainer | virtual |
getBoundingBoxMax(int dimension) const | ParticleContainer | virtual |
getBoundingBoxMin(int dimension) const | ParticleContainer | virtual |
getCellLength() override (defined in AutoPasContainer) | AutoPasContainer | virtual |
getConfigurationAsString() override | AutoPasContainer | virtual |
getCutoff() const override (defined in AutoPasContainer) | AutoPasContainer | virtual |
getEnergy(ParticlePairsHandler *particlePairsHandler, Molecule *m1, CellProcessor &cellProcessor) override (defined in AutoPasContainer) | AutoPasContainer | virtual |
getHaloSize() override | AutoPasContainer | virtual |
getHaloWidthNumCells() (defined in ParticleContainer) | ParticleContainer | virtual |
getInvalidParticles() override (defined in AutoPasContainer) | AutoPasContainer | inlinevirtual |
getMoleculeAtPosition(const double pos[3]) override | AutoPasContainer | virtual |
getName() override (defined in AutoPasContainer) | AutoPasContainer | inlinevirtual |
getNumberOfParticles() override | AutoPasContainer | virtual |
getParticleCellStatistics() | ParticleContainer | inlinevirtual |
getSkin() const override (defined in AutoPasContainer) | AutoPasContainer | virtual |
getTotalSize() override (defined in AutoPasContainer) | AutoPasContainer | inlinevirtual |
initCubicGrid(std::array< unsigned long, 3 > numMoleculesPerDimension, std::array< double, 3 > simBoxLength, size_t seed_offset) override (defined in AutoPasContainer) | AutoPasContainer | virtual |
isInBoundingBox(double r[3]) const | ParticleContainer | virtual |
isInvalidParticleReturner() override (defined in AutoPasContainer) | AutoPasContainer | inlinevirtual |
iterator(ParticleIterator::Type t) override (defined in AutoPasContainer) | AutoPasContainer | virtual |
ParticleContainer(double bBoxMin[3], double bBoxMax[3]) | ParticleContainer | |
ParticleContainer() | ParticleContainer | inline |
printSubInfo(int offset) override (defined in AutoPasContainer) | AutoPasContainer | inlinevirtual |
readXML(XMLfileUnits &xmlconfig) override | AutoPasContainer | virtual |
rebuild(double bBoxMin[3], double bBoxMax[3]) override | AutoPasContainer | virtual |
regionIterator(const double startCorner[3], const double endCorner[3], ParticleIterator::Type t) override (defined in AutoPasContainer) | AutoPasContainer | virtual |
requiresForceExchange() const (defined in ParticleContainer) | ParticleContainer | inlinevirtual |
setCutoff(double cutoff) override | AutoPasContainer | inlinevirtual |
traverseCells(CellProcessor &cellProcessor) override | AutoPasContainer | virtual |
traverseNonInnermostCells(CellProcessor &cellProcessor) override (defined in AutoPasContainer) | AutoPasContainer | virtual |
traversePartialInnermostCells(CellProcessor &cellProcessor, unsigned int stage, int stageCount) override (defined in AutoPasContainer) | AutoPasContainer | virtual |
update() override | AutoPasContainer | virtual |
updateBoundaryAndHaloMoleculeCaches() override | AutoPasContainer | virtual |
updateInnerMoleculeCaches() override | AutoPasContainer | virtual |
updateMoleculeCaches() override | AutoPasContainer | virtual |
~AutoPasContainer() override (defined in AutoPasContainer) | AutoPasContainer | inline |
~MemoryProfilable() (defined in MemoryProfilable) | MemoryProfilable | inlinevirtual |
~ParticleContainer() | ParticleContainer | inlinevirtual |