5#ifndef MARDYN_VIRIAL2D_H
6#define MARDYN_VIRIAL2D_H
8#include "ProfileBase.h"
9#include "plugins/SpatialProfile.h"
20 _densityProfile(densProf), _dofProfile(dofProf), _kineticProfile(kinProf), _local3dProfile(), _global3dProfile() {
27 for (
unsigned short d = 0; d < 3; d++) {
28 _local3dProfile[uID][d] += mol.Vi(d);
33 for (
unsigned short d = 0; d < 3; d++) {
34 domainDecomp->collCommAppendDouble(_local3dProfile[uID][d]);
39 for (
unsigned short d = 0; d < 3; d++) {
40 _global3dProfile[uID][d] = domainDecomp->collCommGetDouble();
45 void output(
string prefix,
long unsigned accumulatedDatasets)
final;
47 void reset(
unsigned long uID)
final {
48 for (
unsigned d = 0; d < 3; d++) {
49 _local3dProfile[uID][d] = 0.0;
50 _global3dProfile[uID][d] = 0.0;
62 std::map<unsigned, std::array<double, 3>> _local3dProfile;
64 std::map<unsigned, std::array<double, 3>> _global3dProfile;
67 void writeDataEntry(
unsigned long uID, ofstream& outfile)
const final;
Records (NO OUTPUT) the DOF of molecules per bin specified by Sampling grid in KartesianProfile.
Definition: DOFProfile.h:15
Outputs the number density of molecules per bin specified by Sampling grid in KartesianProfile.
Definition: DensityProfile.h:14
handle boundary region and multiple processes
Definition: DomainDecompBase.h:51
FullMolecule modeled as LJ sphere with point polarities.
Definition: FullMolecule.h:18
Records (NO OUTPUT) the 2xKinetic Profile of molecules per bin specified by Sampling grid in Kartesia...
Definition: KineticProfile.h:14
Base class for all Profile outputs used by KartesianProfile.
Definition: ProfileBase.h:34
Definition: Virial2DProfile.h:17
void record(Molecule &mol, unsigned long uID) final
The recording step defines what kind of data needs to be recorded for a single molecule with a corres...
Definition: Virial2DProfile.h:26
void collectRetrieve(DomainDecompBase *domainDecomp, unsigned long uID) final
Get global values after AllReduceSum per bin. Write to e.g. _globalProfile.
Definition: Virial2DProfile.h:38
int comms() final
1D profiles like a number density profile should return 1 here. 3D profiles that have 3 entries per b...
Definition: Virial2DProfile.h:54
void output(string prefix, long unsigned accumulatedDatasets) final
Whatever is necessary to output for this profile.
Definition: Virial2DProfile.cpp:11
void reset(unsigned long uID) final
Used to reset all array contents for a specific uID in order to start the next recording timeframe.
Definition: Virial2DProfile.h:47
void collectAppend(DomainDecompBase *domainDecomp, unsigned long uID) final
Append all necessary communication per bin to the DomainDecomposition. Append from e....
Definition: Virial2DProfile.h:32