Scientific Computing II - Summer 16: Difference between revisions

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| tumonline = [https://campus.tum.de/tumonline/LV.detail?clvnr=950181823 Scientific Computing II] (still summer 2015!)
| tumonline = [https://campus.tum.de/tumonline/LV.detail?clvnr=950181823 Scientific Computing II] (still summer 2015!)
}}
}}
= Contents =
This course provides a deeper knowledge in two important fields of scientific computing:
* iterative solution of large sparse systems of linear equations:
** relaxation methods
** multigrid methods
** steepest descent
** conjugate gradient methods
* molecular dynamics simulations
** the physical model
** the mathematical model
** approximations and discretization
** implementational aspects
** parallelisation
** examples of nanofluidic simulations
The course is conceived for students in computer science, mathematics, or some field of science or engineering who already have a certain background in the numerical treatment of (partial) differential equations.
= Literature =
* William L. Briggs, Van Emden Henson, Steve F. McCormick. A Multigrid Tutorial. Second Edition, SIAM, 2000 (available as eBook in the TUM library)
* Ulrich Trottenberg, Cornelis Oosterlee, Anton Schüller. Multigrid. Elsevier, 2001 (available as eBook in the TUM library)
* [http://www.cs.cmu.edu/~jrs/ J.R. Shewchuk]. An Introduction to the Conjugate Gradient Method Without the Agonizing Pain ([http://www.cs.cmu.edu/~quake-papers/painless-conjugate-gradient.pdf download as PDF]). 1994.
* V. Eijkhout: [http://tacc-web.austin.utexas.edu/veijkhout/public_html/istc/istc.html Introduction to High-Performance Scientific Computing] (textbook, available as PDF on the website)
* M. Griebel, S. Knapek, G. Zumbusch, and A. Caglar. Numerical simulation in molecular dynamics. Springer, 2007  (available as eBook in the TUM library)
* M. P. Allen and D. J. Tildesley. Computer Simulation of Liquids. Oxford University Press, 2003.
* D. Frenkel and B. Smith. Understanding Molecular Simulation from Algorithms to Applications. Academic Press (2nd ed.), 2002.
* R. J. Sadus. Molecular Simulation of Fluids; Theory, Algorithms and Object-Orientation. Elsevier, 1999.
* D. Rapaport. The art of molecular dynamics simulation. Camebridge University Press, 1995.
[[Category:Teaching]]

Revision as of 15:19, 4 January 2016

Term
Summer 2016
Lecturer
Prof. Dr. Michael Bader
Time and Place
currently scheduled for Monday 14-16, lecture room MI HS 2
Audience
Computational Science and Engineering, 2nd semester
others: see module description
Tutorials
Carsten Uphoff, M.Sc.
time/day t.b.a.
Exam
written exam, time/day t.b.a.
Semesterwochenstunden / ECTS Credits
2V + 2Ü / 5 Credits
TUMonline
Scientific Computing II (still summer 2015!)



Contents

This course provides a deeper knowledge in two important fields of scientific computing:

  • iterative solution of large sparse systems of linear equations:
    • relaxation methods
    • multigrid methods
    • steepest descent
    • conjugate gradient methods
  • molecular dynamics simulations
    • the physical model
    • the mathematical model
    • approximations and discretization
    • implementational aspects
    • parallelisation
    • examples of nanofluidic simulations

The course is conceived for students in computer science, mathematics, or some field of science or engineering who already have a certain background in the numerical treatment of (partial) differential equations.

Literature

  • William L. Briggs, Van Emden Henson, Steve F. McCormick. A Multigrid Tutorial. Second Edition, SIAM, 2000 (available as eBook in the TUM library)
  • Ulrich Trottenberg, Cornelis Oosterlee, Anton Schüller. Multigrid. Elsevier, 2001 (available as eBook in the TUM library)
  • J.R. Shewchuk. An Introduction to the Conjugate Gradient Method Without the Agonizing Pain (download as PDF). 1994.
  • V. Eijkhout: Introduction to High-Performance Scientific Computing (textbook, available as PDF on the website)
  • M. Griebel, S. Knapek, G. Zumbusch, and A. Caglar. Numerical simulation in molecular dynamics. Springer, 2007 (available as eBook in the TUM library)
  • M. P. Allen and D. J. Tildesley. Computer Simulation of Liquids. Oxford University Press, 2003.
  • D. Frenkel and B. Smith. Understanding Molecular Simulation from Algorithms to Applications. Academic Press (2nd ed.), 2002.
  • R. J. Sadus. Molecular Simulation of Fluids; Theory, Algorithms and Object-Orientation. Elsevier, 1999.
  • D. Rapaport. The art of molecular dynamics simulation. Camebridge University Press, 1995.